Sapphire
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Sample Code Repository for Sapphire
The Sample Code Repository, environment variable $SAMPLES_HOME on each HPC system, contains helpful examples of frequently‑used procedures, routines, scripts, codes, and best practices. A categorized index of the supported samples is shown below and is also included in the file $SAMPLES_HOME/INDEX.txt. Each self‑contained sample resides in a subdirectory whose name corresponds to the index entry.
| Sample Subdirectory | Description |
|---|---|
| Applications | |
| Abaqus_Example | Basic batch script and input deck for an Abaqus job |
| AVUS_Example | Sample input files and job script for the AVUS application. |
| CTH_Example | Sample scripts for submitting CTH batch jobs |
| Fluent_Example | Sample input files and job script for the Fluent application |
| Gamess_Example | Sample input files and job script for the Gamess application |
| GASP_Example | Code and instructions for executing a sample test case from the GASP distribution on one processor |
| LS_DYNA_Example | Sample input file and job script for the LS_DYNA application |
| STAR_CD_Example | Sample input file and job script for the STAR_CD application |
| TBMD_Example | Instructions and files for a small test run of the CHSSI version of TBMD |
| VASP_Example | Sample input files and job script for the VASP application |
| Batch Environment | |
| BatchScript_Example | Simple PBS batch script showing all required options |
| Data Management | |
| MPSCP_to_DMS | Instructions and sample scripts on using the mpscp utility for transferring files to/from DMS |
| OST_Stripes | Instructions and examples for striping large files on the Lustre file systems. |
| Sync_Dirs_With_DMS | Sync an HPC directory with DMS. Copy files and directories that are new or have changed |
| Libraries | |
| PETSC_Example | Example of compiling a code using the PETSC libraries |
| Parallel Environment | |
| SHMEM_Example | Instructions and sample code for compiling and running a simple SHMEM application |
| Programming Environment | |
| Endian_Conversion | Using the assign utility to convert between big-endian and little-endian data formats |
| MPI_Totalview | Simple Fortran program, compile command, and job script to demonstrate using the Totalview debugger |
| Miscellaneous | |
| Floating_Point_Exception | Managing Floating Point Exceptions within a Fortran program |
| Module_Swap_Example | Batch script demonstrating how to swap one module version for another |
Last update: January 25, 2010
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